HIV Reservoirs: Methods and Protocols (Methods in Molecular Biology 2407)
Enhance your HIV research toolkit with HIV Reservoirs: Methods and Protocols, a cutting-edge volume published as part of Springer’s esteemed Methods in Molecular Biology series. This practical handbook presents robust, reproducible protocols essential for detecting, quantifying, and characterizing latent HIV reservoirs—a major barrier to curing HIV infection.
🔬 Key Features & Protocol Highlights
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Gold‑standard Quantification Techniques – Includes detailed methods for quantitative viral outgrowth assay (QVOA), Tat/Rev induced limiting dilution assay (TILDA), and intact proviral DNA assays (IPDA) essential for measuring replication-competent and latent HIV reservoirs.
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PCR and Digital PCR Protocols – Step-by-step guidance for Alu-gag PCR, ddPCR, and IPDA to distinguish between integrated, defective, and intact proviral genomes with high sensitivity and precision.
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Advanced Single-Cell Reservoir Mapping – Methods such as RNA-flow FISH and dual RNA/protein detection assays that enable phenotyping of individual HIV‑infected CD4+ T cells with exceptional accuracy.
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Tissue-Level Reservoir Analysis – Protocols for detecting HIV in tissue biopsies using combined mRNA, DNA, and protein labeling—able to identify reservoirs beyond the bloodstream.
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Shock-and-Kill & Block-and-Lock Assays – Laboratory procedures for implementing latency-reversal and silencing agents, evaluating immune-mediated eradication strategies, and examining the UPR and CRISPR-based editing approaches for reservoir elimination.
Each protocol follows the trusted Springer structure—introduction, materials, stepwise methods, expert notes, and troubleshooting—to ensure reproducibility and ease of use in complex HIV research workflows.
